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Sample GSM1303519 Query DataSets for GSM1303519
Status Public on Jun 30, 2014
Title Corneal primary cells on AM
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics cell type: primary corneal cell line
sample condition: primary corneal cell line; on AM
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Corneal primary cells on AM
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.728305646
cg00000108 0.930133743
cg00000109 0.85863447
cg00000165 0.077592598
cg00000236 0.835456507
cg00000289 0.616036154
cg00000292 0.807253011
cg00000321 0.183920559
cg00000363 0.095124534
cg00000622 0.023051518
cg00000658 0.786680616
cg00000714 0.174621176
cg00000721 0.900604618
cg00000734 0.046489754
cg00000769 0.057785828
cg00000807 0.725992751
cg00000884 0.799184043
cg00000905 0.124430741
cg00000924 0.442115192
cg00000948 0.803517768

Total number of rows: 485577

Table truncated, full table size 10863 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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