NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1303517 Query DataSets for GSM1303517
Status Public on Jun 30, 2014
Title CNL01i-ipsc - P9
Sample type genomic
 
Source name corneal
Organism Homo sapiens
Characteristics cell type: ips derived cell line
sample condition: ips derived cell line; primary corneal; passage 9
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description CNL01i-ipsc - P9
genomic DNA from cell lines
Data processing BeadStudio software v3.2
 
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
E-mail(s) jie.tang@cshs.org
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
 
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.066833927
cg00000108 0.928594267
cg00000109 0.846719758
cg00000165 0.092098208
cg00000236 0.833907695
cg00000289 0.531230715
cg00000292 0.521594015
cg00000321 0.184850081
cg00000363 0.042502056
cg00000622 0.026830738
cg00000658 0.794767732
cg00000714 0.062947467
cg00000721 0.912655332
cg00000734 0.053680145
cg00000769 0.056848686
cg00000807 0.661865314
cg00000884 0.794342395
cg00000905 0.059440561
cg00000924 0.470999308
cg00000948 0.858515112

Total number of rows: 485577

Table truncated, full table size 10865 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap