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Sample GSM1303515 Query DataSets for GSM1303515
Status Public on Jun 30, 2014
Title 14i-ipsc - P52
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 14
cell type: ips derived cell line
sample condition: ips derived cell line; patient 14; passage 52
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 14i-ipsc - P52
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.757531089
cg00000108 0.929546637
cg00000109 0.850134317
cg00000165 0.101261198
cg00000236 0.86742509
cg00000289 0.64485226
cg00000292 0.905314478
cg00000321 0.156815873
cg00000363 0.09048411
cg00000622 0.023448234
cg00000658 0.827194343
cg00000714 0.25915164
cg00000721 0.886932973
cg00000734 0.048510378
cg00000769 0.055863314
cg00000807 0.719983984
cg00000884 0.846793101
cg00000905 0.080125497
cg00000924 0.495622554
cg00000948 0.887716325

Total number of rows: 485577

Table truncated, full table size 10865 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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