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Sample GSM1303514 Query DataSets for GSM1303514
Status Public on Jun 30, 2014
Title 14i-ipsc - P6
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 14
cell type: ips derived cell line
sample condition: ips derived cell line; patient 14; passage 6
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 14i-ipsc - P6
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.690552371
cg00000108 0.931981743
cg00000109 0.852487629
cg00000165 0.085611444
cg00000236 0.814540537
cg00000289 0.683328605
cg00000292 0.885573757
cg00000321 0.172661306
cg00000363 0.082380394
cg00000622 0.025491993
cg00000658 0.783188014
cg00000714 0.235623595
cg00000721 0.900593565
cg00000734 0.047167979
cg00000769 0.050712195
cg00000807 0.797251963
cg00000884 0.838650548
cg00000905 0.109283754
cg00000924 0.499460899
cg00000948 0.863251699

Total number of rows: 485577

Table truncated, full table size 10863 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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