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Sample GSM1303513 Query DataSets for GSM1303513
Status Public on Jun 30, 2014
Title Fibroblast 14 - parental
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 14
cell type: fibroblast parental cell line
sample condition: fibroblast parental cell line; patient 14; no treatment
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Fibroblast 14 - parental
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.763362688
cg00000108 0.916577226
cg00000109 0.801878987
cg00000165 0.092637758
cg00000236 0.828806557
cg00000289 0.60888753
cg00000292 0.845316209
cg00000321 0.156848367
cg00000363 0.068035482
cg00000622 0.030794687
cg00000658 0.82572632
cg00000714 0.24992535
cg00000721 0.88225873
cg00000734 0.041902915
cg00000769 0.057233298
cg00000807 0.788123883
cg00000884 0.836411005
cg00000905 0.09058294
cg00000924 0.495237875
cg00000948 0.886589452

Total number of rows: 485577

Table truncated, full table size 10864 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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