GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM1303512 Query DataSets for GSM1303512
Status Public on Jun 30, 2014
Title 83i-ipsc - P39
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 83
cell type: ips derived cell line
sample condition: ips derived cell line; patient 83; passage 39
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 83i-ipsc - P39
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.773363418
cg00000108 0.918152129
cg00000109 0.866283466
cg00000165 0.337577426
cg00000236 0.849359458
cg00000289 0.556529011
cg00000292 0.630290186
cg00000321 0.366721412
cg00000363 0.358109985
cg00000622 0.034373781
cg00000658 0.842267323
cg00000714 0.136910532
cg00000721 0.91483339
cg00000734 0.047720977
cg00000769 0.061194442
cg00000807 0.869914109
cg00000884 0.840261243
cg00000905 0.052384821
cg00000924 0.490230262
cg00000948 0.910628545

Total number of rows: 485577

Table truncated, full table size 10863 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap