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Sample GSM1303511 Query DataSets for GSM1303511
Status Public on Jun 30, 2014
Title 83i-ipsc - P13
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 83
cell type: ips derived cell line
sample condition: ips derived cell line; patient 83; passage 13
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description 83i-ipsc - P13
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.053840949
cg00000108 0.884245276
cg00000109 0.721685726
cg00000165 0.114738744
cg00000236 0.748663118
cg00000289 0.354939543
cg00000292 0.449297764
cg00000321 0.20092374
cg00000363 0.053650816
cg00000622 0.03229176
cg00000658 0.810460888
cg00000714 0.108267718
cg00000721 0.833076671
cg00000734 0.039934637
cg00000769 0.052527897
cg00000807 0.829233964
cg00000884 0.804182458
cg00000905 0.079284765
cg00000924 0.483510303
cg00000948 0.859078461

Total number of rows: 485577

Table truncated, full table size 10864 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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