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Sample GSM1303510 Query DataSets for GSM1303510
Status Public on Jun 30, 2014
Title Fibroblast 83 - parental
Sample type genomic
Source name corneal
Organism Homo sapiens
Characteristics individual: patient 83
cell type: fibroblast parental cell line
sample condition: fibroblast parental cell line; patient 83; no treatment
Extracted molecule genomic DNA
Extraction protocol genomic DNA was extracted and purified using Qiagen DNeasy Kit according to standard instructions
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation 450k Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Fibroblast 83 - parental
genomic DNA from cell lines
Data processing BeadStudio software v3.2
Submission date Jan 08, 2014
Last update date Jun 30, 2014
Contact name Jie Tang
Organization name Cedars Sinai Medical Center
Street address 8700 Beverly Blvd
City Los Angeles
ZIP/Postal code 90048
Country USA
Platform ID GPL13534
Series (1)
GSE53918 Differentiation of human limbal-derived induced pluripotent stem cells into limbal-like epithelium

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.131532298
cg00000108 0.835408737
cg00000109 0.482674522
cg00000165 0.133231297
cg00000236 0.826390428
cg00000289 0.491978792
cg00000292 0.655867979
cg00000321 0.21500106
cg00000363 0.154456511
cg00000622 0.030919007
cg00000658 0.807672968
cg00000714 0.09374662
cg00000721 0.8751596
cg00000734 0.045320651
cg00000769 0.046181782
cg00000807 0.715091524
cg00000884 0.767055573
cg00000905 0.070965089
cg00000924 0.462984536
cg00000948 0.805759672

Total number of rows: 485577

Table truncated, full table size 10863 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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