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Sample GSM1282809 Query DataSets for GSM1282809
Status Public on Dec 09, 2013
Title X6055432099_R03C01_genomic DNA from whole blood_array
Sample type genomic
Source name whole blood
Organism Homo sapiens
Characteristics individual: Family 19 monozygotic twin 1
gender: Female
pain temperature: 47.5
age: 58.58727
medip-seq id: 1036126
450k chip: 6055432099
order on 450k chip: R03C01
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted and purified from whole blood samples
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Family 19 monozygotic twin 1
Data processing BeadStudio software for 450k data.
Submission date Dec 09, 2013
Last update date Dec 09, 2013
Contact name Jordana Bell
Organization name King's College London
Department Department of Twin Research and Genetic Epidemiology
Street address St Thomas' Hospital, Westminster Bridge Rd
City London
ZIP/Postal code SE1 7EH
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE53128 Differential Methylation Of The TRPA1 Promoter In Pain Sensitivity: DNA methylation 450k array
GSE53130 Differential Methylation Of The TRPA1 Promoter In Pain Sensitivity

Data table header descriptions
VALUE Average Beta

Data table
ID_REF VALUE Detection.Pval
cg00000029 0.4755344 0
cg00000108 0.9525278 0
cg00000109 0.8729376 0
cg00000165 0.1924904 0
cg00000236 0.6572083 0
cg00000289 0.759708 0
cg00000292 0.8208128 0
cg00000321 0.2606425 0
cg00000363 0.3778475 0
cg00000622 0.02844849 0
cg00000658 0.8180462 0
cg00000714 0.167344 0
cg00000721 0.919649 0
cg00000734 0.06052883 0
cg00000769 0.09345355 0
cg00000807 0.8098974 0
cg00000884 0.8458619 0
cg00000905 0.06617949 0
cg00000924 0.5391414 0
cg00000948 0.8988332 0

Total number of rows: 485577

Table truncated, full table size 10995 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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