|
Status |
Public on Feb 27, 2014 |
Title |
genomic DNA from PBMC 76 Smoker |
Sample type |
genomic |
|
|
Source name |
PBMC 76
|
Organism |
Homo sapiens |
Characteristics |
gender: Female sample type: PBMC disease state: Smoker
|
Extracted molecule |
genomic DNA |
Extraction protocol |
genomic DNA was extracted and purified from PBMC samples using QIAamp DNA Blood Mini Kit according to standard instructions
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
|
|
|
Hybridization protocol |
bisulfite converted DNA was amplified, fragmented and hybridized to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
Description |
smoker PBMC sample
|
Data processing |
Genome Studios V2011.1
|
|
|
Submission date |
Dec 05, 2013 |
Last update date |
Aug 04, 2015 |
Contact name |
Robert A Philibert |
E-mail(s) |
robert-philibert@uiowa.edu
|
Phone |
3193534986
|
Organization name |
University of Iowa
|
Department |
Psychiatry
|
Street address |
MEB, 500 Newton Road, Room 2-126D
|
City |
Iowa City |
State/province |
Iowa |
ZIP/Postal code |
52242 |
Country |
USA |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE53045 |
Epigenome analysis of smoking in peripheral blood mononuclear cells (PBMC) samples |
|