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Status |
Public on Mar 03, 2015 |
Title |
genomic DNA from peripheral blood, subject affected by Down syndrome, 1001 |
Sample type |
genomic |
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Source name |
peripheral whole blood, subject 1001
|
Organism |
Homo sapiens |
Characteristics |
group: subject affected by Down syndrome (DS) disease state: Down syndrome family: 01 gender: Male age: 18 tissue: peripheral whole blood
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Genomic DNA was extracted and purified from peripheral whole blood using the QIAamp 96 DNA Blood Kit (QIAGEN)
|
Label |
Cy5 and Cy3
|
Label protocol |
Standard Illumina Protocol
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|
|
Hybridization protocol |
Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
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Data processing |
GenomeStudio (2010.3) Methylation module (1.8.5) software raw_data.txt includes Unmethylated and methylated signal intensities
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Submission date |
Nov 20, 2013 |
Last update date |
Mar 03, 2015 |
Contact name |
Maria Giulia Bacalini |
E-mail(s) |
mugiu17@hotmail.com
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Phone |
00390512094748
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Organization name |
IRCCS Istituto delle Scienze Neurologiche di Bologna
|
Department |
Brain Aging Laboratory
|
Street address |
Via Altura 3
|
City |
Bologna |
ZIP/Postal code |
40139 |
Country |
Italy |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE52588 |
Identification of a DNA methylation signature in blood from subjects affected by Down syndrome |
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