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Sample GSM126508 Query DataSets for GSM126508
Status Public on Sep 06, 2006
Title Slide 635
Sample type RNA
 
Channel 1
Source name Duodenum, susceptible animal 1046/01
Organism Ovis aries
Characteristics Susceptible to gastrointestinal nematodes
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Duodenum, resistant animal 1044/01
Organism Ovis aries
Characteristics Resisant to gastrointestinal nematodes
Extracted molecule total RNA
Label Cy3
 
 
Description Comparing gene expression in duodenum tissue of parasite resistant and susceptible sheep T = 175 days
Data processing Normalized using a spatial mixed model analysis which includes splines
 
Submission date Aug 09, 2006
Last update date Sep 04, 2006
Contact name Orla Mary Keane
E-mail(s) orla.keane@agresearch.co.nz
Phone 00 64 3 4797659
Fax 00 64 3 4775413
Organization name AgResearch
Department Animal Genomics
Lab Molecular Biology Unit
Street address 710 Cumberland St
City Dunedin
State/province Otago
ZIP/Postal code 9001
Country New Zealand
 
Platform ID GPL4076
Series (1)
GSE5492 Gene expression in the duodenum of sheep genetically resistant or susceptible to nematodes

Data table header descriptions
ID_REF
VALUE Log10(Cy5/Cy3)
NORMCH1 Normalised Cy5 value
NORMCH2 Normalised Cy3 value

Data table
ID_REF VALUE NORMCH1 NORMCH2
267199 0.05 1534 1360
267184 0.02 1237 1180
267169
267154 0.01 1517 1496
267139 0.07 1823 1554
267124 -0.02 1698 1790
267109 0.1 22711 18219
267094
267079 0.03 4349 4071
267064 0.01 1062 1048
267049 -0.05 1802 2009
267034 0.06 873 765
267019 -0.06 764 881
267004 0.06 1020 883
266989 0.11 1133 872
266974 -0.03 1255 1350
266959 -0.08 4335 5245
266944 0.04 1107 1002
266929 0.01 1343 1327
266914 -0.02 2992 3143

Total number of rows: 11520

Table truncated, full table size 223 Kbytes.




Supplementary data files not provided

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