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Sample GSM126500 Query DataSets for GSM126500
Status Public on Sep 06, 2006
Title Slide 627
Sample type RNA
 
Channel 1
Source name Duodenum, susceptible animal 1053/01
Organism Ovis aries
Characteristics Susceptible to gastrointestinal nematodes
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Duodenum, resistant animal 1044/01
Organism Ovis aries
Characteristics Resistant to gastrointestinal nematodes
Extracted molecule total RNA
Label Cy3
 
 
Description Comparing gene expression in duodenum tissue of parasite resistant and susceptible sheep T = 175 days
Data processing Normalized using a spatial mixed model analysis which includes splines
 
Submission date Aug 09, 2006
Last update date Sep 04, 2006
Contact name Orla Mary Keane
E-mail(s) orla.keane@agresearch.co.nz
Phone 00 64 3 4797659
Fax 00 64 3 4775413
Organization name AgResearch
Department Animal Genomics
Lab Molecular Biology Unit
Street address 710 Cumberland St
City Dunedin
State/province Otago
ZIP/Postal code 9001
Country New Zealand
 
Platform ID GPL4076
Series (1)
GSE5492 Gene expression in the duodenum of sheep genetically resistant or susceptible to nematodes

Data table header descriptions
ID_REF
VALUE Log10(Cy5/Cy3)
NORMCH1 Normalised Cy5 value
NORMCH2 Normalised Cy3 value

Data table
ID_REF VALUE NORMCH1 NORMCH2
267199 -0.08 2306 2744
267184 -0.08 1494 1807
267169
267154
267139 0.14 2136 1564
267124 0.01 2183 2140
267109 -0.03 16316 17297
267094
267079 -0.08 7565 9039
267064 0.03 1390 1309
267049 0 3166 3197
267034 0.06 1386 1221
267019 -0.05 958 1082
267004 0 1311 1312
266989 -0.02 1339 1390
266974 -0.08 1615 1946
266959 -0.06 8652 10018
266944 0.09 1334 1094
266929 -0.03 1274 1352
266914 0.03 3587 3340

Total number of rows: 11520

Table truncated, full table size 237 Kbytes.




Supplementary data files not provided

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