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Sample GSM12069 Query DataSets for GSM12069
Status Public on Nov 25, 2003
Title C001 Renal Clear Cell Carcinoma U133B
Sample type RNA
 
Source name Trizol isolation of total RNA from Renal Clear Cell Carcinoma tissue
Organism Homo sapiens
Extracted molecule total RNA
 
Description Age = 58; Gender = Male; Left Kidney; Tumor Type = clear cell; Tumor Fuhrman Grade = 1; Tumor Capsule Penetration = true; Tumor Perinephric Fat Invasion = false; Tumor Renal Sinus Invasion = false; Tumor Renal Vein Invasion = false; Tumor Location: lower; Scaling Target = 500; Scaling Factor = 11.56; Raw Q = 2.72; Noise = 3.47; Background = 68.43.
Keywords = kidney
Keywords = renal
Keywords = RCC
Keywords = carcinoma
Keywords = cancer
Lot batch = 2002912
 
Submission date Oct 22, 2003
Last update date May 28, 2005
Contact name Marc E. Lenburg
E-mail(s) mlenburg@bu.edu
Phone 617-414-1375
Fax 617-414-1646
URL http://gg.bu.edu
Organization name Boston University School of Medicine
Department Genetics and Genomics
Street address 715 Albany Street, E613B
City Boston
State/province MA
ZIP/Postal code 02130
Country USA
 
Platform ID GPL97
Series (1)
GSE781 Normal and Renal Cell Carcinoma Kidney Tissue, Human

Data table header descriptions
ID_REF
VALUE MAS 5.0 Statistical Algorithm (mean scaled to 500)
ABS_CALL MAS 5.0 Absent, Marginal, Present call with Alpha1 = 0.05, Alpha2 = 0.065

Data table
ID_REF VALUE ABS_CALL
AFFX-BioB-5_at 1100.4 P
AFFX-BioB-M_at 2094 P
AFFX-BioB-3_at 941.1 P
AFFX-BioC-5_at 2508.2 P
AFFX-BioC-3_at 1325.9 P
AFFX-BioDn-5_at 2632.8 P
AFFX-BioDn-3_at 12868.2 P
AFFX-CreX-5_at 25184.4 P
AFFX-CreX-3_at 35899.3 P
AFFX-DapX-5_at 44.5 A
AFFX-DapX-M_at 74.6 A
AFFX-DapX-3_at 34.4 A
AFFX-LysX-5_at 7.6 A
AFFX-LysX-M_at 98.3 A
AFFX-LysX-3_at 42.9 A
AFFX-PheX-5_at 22.5 A
AFFX-PheX-M_at 30.3 A
AFFX-PheX-3_at 91.3 A
AFFX-ThrX-5_at 36.5 A
AFFX-ThrX-M_at 30.1 A

Total number of rows: 22645

Table truncated, full table size 398 Kbytes.




Supplementary file Size Download File type/resource
GSM12069.CEL.gz 3.3 Mb (ftp)(http) CEL

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