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Sample GSM1201760 Query DataSets for GSM1201760
Status Public on Aug 08, 2013
Title Stanford_ChipSeq_MEL_H3K27me3_IgG-rab
Sample type SRA
 
Source name MEL
Organism Mus musculus
Characteristics lab: Stanford-m
lab description: Snyder - Stanford University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: MEL
cell organism: mouse
cell description: Leukemia (K562 analog)
cell sex: M
antibody: H3K27me3
antibody antibodydescription: rabbit polyclonal. Antibody Target: H3K27me3
antibody targetdescription: Trimethylated histone H3 (Lys27). Broad species cross-reactivity expected.
antibody vendorname: Millipore
antibody vendorid: 07-449
treatment: None
treatment description: No special treatment or protocol applies
control: IgG-rab
control description: Input signal from Normal Rabbit IgG ChIP-seq.
age: immortalized
age description: Immortal cells
control: IgG-rab
control description: Input signal from Normal Rabbit IgG ChIP-seq.
controlid: MEL/None/Input/IgG-rab
labversion: PeakSeq1.0
strain: Unknown
strain description: Unknown strain origin
Biomaterial provider Weissman lab
Treatment protocol None
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeSydhHist
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeSydhHist
 
Submission date Aug 05, 2013
Last update date May 15, 2019
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9185
Series (1)
GSE32218 Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale
Relations
BioSample SAMN02314100
SRA SRX467561
Named Annotation GSM1201760_mm9_wgEncodeSydhHistMelH3k27me3IggrabPk.bigWig

Supplementary file Size Download File type/resource
GSM1201760_mm9_wgEncodeSydhHistMelH3k27me3IggrabPk.bigWig 206.9 Mb (ftp)(http) BIGWIG
GSM1201760_mm9_wgEncodeSydhHistMelH3k27me3IggrabPk.narrowPeak.gz 670.3 Kb (ftp)(http) NARROWPEAK
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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