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Sample GSM1198920 Query DataSets for GSM1198920
Status Public on Dec 01, 2013
Title 2515T
Sample type genomic
Source name Tumor tissue from patient 2515
Organism Homo sapiens
Characteristics tissue: esophageal adenocarcinoma tumor
Extracted molecule genomic DNA
Extraction protocol QiaAmp DNA FFPE Tissue Kit
Label streptavidin phycoerythrin
Label protocol Affymetrix 6.0
Hybridization protocol Affymetrix 6.0
Scan protocol Affymetrix 6.0
Description hybridized to SNP6.0
Data processing GCOS to Partek Segmentation
primary data description: SNPs and CNV
Submission date Jul 31, 2013
Last update date Dec 01, 2013
Contact name William Armand LaFramboise
Phone 412-623-6160
Organization name University of Pittsburgh
Department Pathology
Street address 5230 Centre Avenue
City Pittsburgh
State/province PA
ZIP/Postal code 15232
Country USA
Platform ID GPL6801
Series (1)
GSE49396 Affymetrix SNP 6.0 data for analysis of esophageal adenocarcinoma samples

Supplementary file Size Download File type/resource
GSM1198920_11_0109_GenomeWideSNP_6_.CEL.gz 30.0 Mb (ftp)(http) CEL
GSM1198920_11_0109_GenomeWideSNP_6_.birdseed-v2.chp.gz 13.1 Mb (ftp)(http) CHP
Processed data provided as supplementary file

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