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Sample GSM1194277 Query DataSets for GSM1194277
Status Public on Oct 08, 2016
Title NCI-H226
Sample type genomic
 
Source name Lung
Organism Homo sapiens
Characteristics tissue: Lung
cell line: NCI-H226
cell type: Cancer cell line
Extracted molecule genomic DNA
Extraction protocol unknown
Label Cy3, Cy5
Label protocol Standard Illumina labelling protocol
 
Hybridization protocol Bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using High Scan SQ using standard recommended Illumina scanner setting
Description NCI60 panel
Data processing Genome Studio V2011.2
Unmethylated and methylated signal intensities
 
Submission date Jul 23, 2013
Last update date Oct 08, 2016
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platform ID GPL13534
Series (1)
GSE49143 The NCI60 DNA methylome

Data table header descriptions
ID_REF
VALUE Average Beta
NCI-H226.Detection Pval
NCI-H226.Signal_A
NCI-H226.Signal_B

Data table
ID_REF VALUE NCI-H226.Detection Pval NCI-H226.Signal_A NCI-H226.Signal_B
cg00000029 0.6149133 0.00 1561.315 2652.818
cg00000108 0.9467014 0.00 265.6738 6495.177
cg00000109 0.8581812 0.00 309.9528 2480.727
cg00000165 0.226681 0.00 2468.072 752.7723
cg00000236 0.9034667 0.00 219.4697 2989.955
cg00000289 0.5695363 0.00 607.392 935.9335
cg00000292 0.920736 0.00 633.3818 8519.008
cg00000321 0.8685382 0.00 1014.566 7363.683
cg00000363 0.5395938 0.00 3353.651 4047.661
cg00000622 0.004863338 0.00 14475.37 71.23139
cg00000658 0.8140187 0.00 1425.59 6677.332
cg00000714 0.3014658 0.00 16085.78 6985.284
cg00000721 0.9173713 0.00 281.0752 4230.822
cg00000734 0.0641513 0.00 10910.92 754.7851
cg00000769 0.07571115 0.00 8954.771 741.7021
cg00000807 0.9091821 0.00 1132.964 12343.25
cg00000884 0.8576566 0.00 242.5718 2064.086
cg00000905 0.130725 0.00 5233.582 802.085
cg00000924 0.4946513 0.00 7295.442 7238.892
cg00000948 0.8950804 0.00 1043.444 9754.843

Total number of rows: 485577

Table truncated, full table size 20810 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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