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Sample GSM1185594 Query DataSets for GSM1185594
Status Public on Aug 07, 2013
Title 7.11 PROS
Sample type genomic
 
Source name Bone marrow cells
Organism Homo sapiens
Characteristics cell type: Promyelocytes
Extracted molecule genomic DNA
Extraction protocol standard as recommended by illumina
Label Cy5 and Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Normal human bone marrow cells
Data processing Background corrected against out-of-band signals and dye bias corrected against Illumina internal controls
 
Submission date Jul 12, 2013
Last update date Aug 08, 2013
Contact name Peter W. Laird
Organization name USC/Norris Cancer Center
Department USC Epigenome Center
Lab Laird
Street address 1450 Biggy St.
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL13534
Series (1)
GSE49618 Sorted normal bone marrow cells from healthy volunteers at Washington University

Data table header descriptions
ID_REF Illumina ID
VALUE Beta-value
RAW_VALUE raw Beta-value
METHYLATED the methylated probe intensity
UNMETHYLATED the unmethylated probe intensity
Detection_Pval the detection p-value of the probe

Data table
ID_REF VALUE RAW_VALUE METHYLATED UNMETHYLATED Detection_Pval
cg00000029 0.50947 0.51786 2900 2700 0
cg00000108 0.93052 0.89109 7683 939 0
cg00000109 0.88941 0.83638 4028 788 0
cg00000165 0.15621 0.222 993 3480 0
cg00000236 0.66978 0.6494 3873 2091 0
cg00000289 0.65554 0.61106 1271 809 0
cg00000292 0.85108 0.82338 8615 1848 0
cg00000321 0.40762 0.43615 3644 4711 0
cg00000363 0.38939 0.42096 5552 7637 0
cg00000622 0.019114 0.022829 287 12285 0
cg00000658 0.86514 0.82443 6865 1462 0
cg00000714 0.15979 0.18995 3834 16350 0
cg00000721 0.93568 0.90661 5446 561 0
cg00000734 0.068157 0.10768 1105 9157 0
cg00000769 0.04423 0.07487 749 9255 0
cg00000807 0.82012 0.80735 10917 2605 0
cg00000884 0.90706 0.86277 4269 679 0
cg00000905 0.057584 0.10533 581 4935 0
cg00000924 0.47112 0.49827 7046 7095 0
cg00000948 0.8788 0.84962 9599 1699 0

Total number of rows: 485577

Table truncated, full table size 18578 Kbytes.




Supplementary file Size Download File type/resource
GSM1185594_7796806148_R01C01_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM1185594_7796806148_R01C01_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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