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Sample GSM1185588 Query DataSets for GSM1185588
Status Public on Aug 07, 2013
Title 8.24 CD19
Sample type genomic
 
Source name Bone marrow cells
Organism Homo sapiens
Characteristics cell type: CD19+ B cells
Extracted molecule genomic DNA
Extraction protocol standard as recommended by illumina
Label Cy5 and Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Normal human bone marrow cells
Data processing Background corrected against out-of-band signals and dye bias corrected against Illumina internal controls
 
Submission date Jul 12, 2013
Last update date Aug 08, 2013
Contact name Peter W. Laird
Organization name USC/Norris Cancer Center
Department USC Epigenome Center
Lab Laird
Street address 1450 Biggy St.
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL13534
Series (1)
GSE49618 Sorted normal bone marrow cells from healthy volunteers at Washington University

Data table header descriptions
ID_REF Illumina ID
VALUE Beta-value
RAW_VALUE raw Beta-value
METHYLATED the methylated probe intensity
UNMETHYLATED the unmethylated probe intensity
Detection_Pval the detection p-value of the probe

Data table
ID_REF VALUE RAW_VALUE METHYLATED UNMETHYLATED Detection_Pval
cg00000029 0.69504 0.67129 1693 829 0
cg00000108 0.75351 0.78137 7248 2028 0
cg00000109 0.91714 0.88171 3317 445 0
cg00000165 0.13554 0.24599 628 1925 0
cg00000236 0.72852 0.72523 2898 1098 0
cg00000289 0.60218 0.60296 773 509 0
cg00000292 0.90519 0.88508 6870 892 0
cg00000321 0.50908 0.56747 2662 2029 0
cg00000363 0.34171 0.42194 4300 5891 0
cg00000622 0.031529 0.037646 158 4039 0
cg00000658 0.92246 0.88688 3975 507 0
cg00000714 0.21584 0.28584 4277 10686 0
cg00000721 0.94645 0.92625 4220 336 0
cg00000734 0.065735 0.12314 893 6359 0
cg00000769 0.01678 0.026214 169 6278 0
cg00000807 0.86551 0.87124 10150 1500 0
cg00000884 0.90801 0.86849 3533 535 0
cg00000905 0.080497 0.17293 566 2707 0
cg00000924 0.41486 0.49433 5624 5753 0
cg00000948 0.95024 0.92528 7219 583 0

Total number of rows: 485577

Table truncated, full table size 18350 Kbytes.




Supplementary file Size Download File type/resource
GSM1185588_6285625091_R01C02_Grn.idat.gz 4.0 Mb (ftp)(http) IDAT
GSM1185588_6285625091_R01C02_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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