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Sample GSM1185584 Query DataSets for GSM1185584
Status Public on Aug 07, 2013
Title 8.10 CD19
Sample type genomic
 
Source name Bone marrow cells
Organism Homo sapiens
Characteristics cell type: CD19+ B cells
Extracted molecule genomic DNA
Extraction protocol standard as recommended by illumina
Label Cy5 and Cy3
Label protocol standard as recommended by illumina
 
Hybridization protocol standard as recommended by illumina
Scan protocol standard as recommended by illumina
Description Normal human bone marrow cells
Data processing Background corrected against out-of-band signals and dye bias corrected against Illumina internal controls
 
Submission date Jul 12, 2013
Last update date Aug 08, 2013
Contact name Peter W. Laird
Organization name USC/Norris Cancer Center
Department USC Epigenome Center
Lab Laird
Street address 1450 Biggy St.
City Los Angeles
State/province California
ZIP/Postal code 90033
Country USA
 
Platform ID GPL13534
Series (1)
GSE49618 Sorted normal bone marrow cells from healthy volunteers at Washington University

Data table header descriptions
ID_REF Illumina ID
VALUE Beta-value
RAW_VALUE raw Beta-value
METHYLATED the methylated probe intensity
UNMETHYLATED the unmethylated probe intensity
Detection_Pval the detection p-value of the probe

Data table
ID_REF VALUE RAW_VALUE METHYLATED UNMETHYLATED Detection_Pval
cg00000029 0.63277 0.68433 3087 1424 0
cg00000108 0.94613 0.93436 11915 837 0
cg00000109 0.93614 0.91914 6320 556 0
cg00000165 0.20061 0.33118 1590 3211 0
cg00000236 0.93598 0.92075 5728 493 0
cg00000289 0.6909 0.72662 1321 497 0
cg00000292 0.88917 0.89462 11265 1327 0
cg00000321 0.32076 0.43293 4386 5745 0
cg00000363 0.37623 0.48597 7657 8099 0
cg00000622 0.015409 0.027396 339 12035 0
cg00000658 0.89955 0.88773 7377 933 0
cg00000714 0.27365 0.37603 7985 13250 0
cg00000721 0.95537 0.94323 8009 482 0
cg00000734 0.048577 0.11789 1169 8747 0
cg00000769 0.017386 0.032548 366 10879 0
cg00000807 0.89288 0.90534 15589 1630 0
cg00000884 0.93697 0.92092 6056 520 0
cg00000905 0.041303 0.12005 785 5754 0
cg00000924 0.43162 0.53991 9098 7753 0
cg00000948 0.94176 0.9293 10975 835 0

Total number of rows: 485577

Table truncated, full table size 18592 Kbytes.




Supplementary file Size Download File type/resource
GSM1185584_6285625091_R03C01_Grn.idat.gz 4.1 Mb (ftp)(http) IDAT
GSM1185584_6285625091_R03C01_Red.idat.gz 4.1 Mb (ftp)(http) IDAT
Processed data included within Sample table

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