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Sample GSM1180925 Query DataSets for GSM1180925
Status Public on Dec 28, 2013
Title LU165-MAX
Sample type RNA
Source name LU165-MAX
Organism Homo sapiens
Characteristics cell line: LU165
cell type: Small Cell Lung Cancer (SCLC)
Treatment protocol Not special additional treatment
Growth protocol Cells where growth on RPMI media with 10% FBS, 1% PS
Extracted molecule total RNA
Extraction protocol Total mRNA where extrated using Trizol Reagent.
Label Cy3
Label protocol Amount of nucleic acid labeled: 100ng. Commercial One-Color Microarray-Based Gene Expression Analysis” v.6.6 kit by following manufacturer instructions. Agilent manual G4140-90040 of September 2012. Amplification: by RNA polymerases.
Hybridization protocol Microarray: SurePrint G3 Human Gene Expression 8x60K v2 Microarray (Agilent microarray design ID 039494)
Scan protocol Scanned on an G2505C DNA microarray scanner (Agilent).
Data processing Images were quantified using Agilent Feature Extraction Software (ver. 10.7)
Submission date Jul 05, 2013
Last update date Dec 29, 2013
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
Platform ID GPL17077
Series (1)
GSE48559 Identification of MAX signature on MAX deficient SCLC cell lines

Data table header descriptions
VALUE Normalized signal intensity

Data table
GE_BrightCorner 16.19156972
DarkCorner 4.688367547
A_23_P117082 11.90464086
A_33_P3246448 5.293499893
A_33_P3318220 4.935594164
A_33_P3236322 5.328029238
A_33_P3319925 5.340545101
A_21_P0000509 14.74586527
A_21_P0000744 11.73920518
A_24_P215804 8.625962727
A_23_P110167 12.60797703
A_33_P3211513 9.881169318
A_23_P103349 5.528803091
A_32_P61480 5.319624598
A_33_P3788124 5.24423447
A_33_P3414202 8.524487589
A_33_P3316686 10.04143491
A_33_P3300975 9.082866265
A_33_P3263061 13.26845957
A_33_P3261373 5.415133902

Total number of rows: 50739

Table truncated, full table size 1259 Kbytes.

Supplementary file Size Download File type/resource
GSM1180925_302_2_2.txt.gz 12.5 Mb (ftp)(http) TXT
Processed data included within Sample table

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