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Sample GSM1180923 Query DataSets for GSM1180923
Status Public on Dec 28, 2013
Title H1417-MAX
Sample type RNA
 
Source name H1417-MAX
Organism Homo sapiens
Characteristics cell line: H1417
cell type: Small Cell Lung Cancer (SCLC)
Treatment protocol Not special additional treatment
Growth protocol Cells where growth on RPMI media with 10% FBS, 1% PS
Extracted molecule total RNA
Extraction protocol Total mRNA where extrated using Trizol Reagent.
Label Cy3
Label protocol Amount of nucleic acid labeled: 100ng. Commercial One-Color Microarray-Based Gene Expression Analysis” v.6.6 kit by following manufacturer instructions. Agilent manual G4140-90040 of September 2012. Amplification: by RNA polymerases.
 
Hybridization protocol Microarray: SurePrint G3 Human Gene Expression 8x60K v2 Microarray (Agilent microarray design ID 039494)
Scan protocol Scanned on an G2505C DNA microarray scanner (Agilent).
Data processing Images were quantified using Agilent Feature Extraction Software (ver. 10.7)
 
Submission date Jul 05, 2013
Last update date Dec 29, 2013
Contact name Manel Esteller
Organization name IDIBELL
Department PEBC
Lab Cancer Epigenetics
Street address Hospital Duran i Reynals Av. Gran Via s/n km, 2.7
City L'Hospitalet de Llobregat
State/province Barcelona
ZIP/Postal code 08908
Country Spain
 
Platform ID GPL17077
Series (1)
GSE48559 Identification of MAX signature on MAX deficient SCLC cell lines

Data table header descriptions
ID_REF
VALUE Normalized signal intensity

Data table
ID_REF VALUE
GE_BrightCorner 16.41078488
DarkCorner 4.448639027
A_23_P117082 7.587174223
A_33_P3246448 5.388976505
A_33_P3318220 5.163345135
A_33_P3236322 5.85639277
A_33_P3319925 5.548524513
A_21_P0000509 13.44182712
A_21_P0000744 12.77921379
A_24_P215804 8.200994297
A_23_P110167 12.92247441
A_33_P3211513 9.822814342
A_23_P103349 5.424399839
A_32_P61480 5.226361496
A_33_P3788124 4.949668044
A_33_P3414202 9.847114026
A_33_P3316686 10.40063347
A_33_P3300975 12.35452567
A_33_P3263061 12.89898604
A_33_P3261373 5.206962938

Total number of rows: 50739

Table truncated, full table size 1259 Kbytes.




Supplementary file Size Download File type/resource
GSM1180923_102_2_4.txt.gz 12.4 Mb (ftp)(http) TXT
Processed data included within Sample table

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