|
Status |
Public on Aug 06, 2013 |
Title |
Blood_IT9 |
Sample type |
genomic |
|
|
Source name |
Autopsy
|
Organism |
Homo sapiens |
Characteristics |
dataset: Data set 1 tissue: blood
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Saliva:Oragene Discover kits (OGR-250, DNA Genotek Inc.);Blood:Qiagen mini kits; Buccal:chlorophorm/isoamylalcohol protocol;internal tissues:chlorophorm/isoamylalcohol protocol
|
Label |
biotin
|
Label protocol |
According to Illumina protocol
|
|
|
Hybridization protocol |
According to Illumina protocol
|
Scan protocol |
According to Illumina protocol
|
Data processing |
The distributions of the six different signals on the 450k array (Type I (red/green and methylated/unmethylated) and Type II (red/green)) were quantile normalized separately.
|
|
|
Submission date |
Jul 02, 2013 |
Last update date |
Aug 06, 2013 |
Contact name |
Roderick Slieker |
E-mail(s) |
r.c.slieker@lumc.nl
|
Organization name |
Leiden University Medical Center
|
Department |
Molecular Cell Biology
|
Street address |
PO Box 9600
|
City |
Leiden |
ZIP/Postal code |
2333RC |
Country |
Netherlands |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE48472 |
Identification and systematic annotation of tissue-specific differentially methylated regions using the Illumina 450k array |
|