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Sample GSM113938 Query DataSets for GSM113938
Status Public on Aug 24, 2007
Title Normal primary thyroid cells, thyroid #4, control treatment
Sample type RNA
Source name thyroid
Organism Homo sapiens
Characteristics Normal primary thyroid cells, control (vehicle) treatment
Extracted molecule total RNA
Extraction protocol Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label biotin
Label protocol 5 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Normal primary thyroid cells, thyroid #4, control treatment
Data processing Ann Arbor quantile-normalized trimmed-mean method
Submission date Jun 12, 2006
Last update date Aug 24, 2007
Contact name Rork Kuick
Phone 734-936-9241
Organization name University of Michigan
Street address University of Michigan, SPH II, 1415 Washington Heights, Room M2533
City Ann Arbor
State/province MI
ZIP/Postal code 48109-2029
Country USA
Platform ID GPL571
Series (1)
GSE5054 Effect of INF-gamma and IL1-beta on thyroid cells

Data table header descriptions
VALUE quantile-normalized trimmed-mean, log-transformed with log(max(x+50,0)+50) using base 10 logarithms

Data table
201963_at 3.462547729
207275_s_at 3.10002573
202912_at 2.737192643
205013_s_at 2.365487985
206513_at 2.298853076
205568_at 1.819543936
205870_at 2.08278537
202357_s_at 2.31386722
207571_x_at 2.238046103
210785_s_at 2.413299764
221245_s_at 2.997823081
220066_at 1.991226076
205467_at 2.315970345
209310_s_at 2.120573931
1405_i_at 1.991226076
204655_at 2.136720567
208075_s_at 2.130333768
214038_at 1.977723605
205692_s_at 2.195899652
204440_at 2.418301291

Total number of rows: 22277

Table truncated, full table size 496 Kbytes.

Supplementary file Size Download File type/resource
GSM113938.CEL.gz 3.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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