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Sample GSM1125321 Query DataSets for GSM1125321
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C222 (BeadChip)
Sample type genomic
Source name C222
Organism Homo sapiens
Characteristics individual identifier: C222
monozygotic twin relationship: MZ twin of C21
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C222
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.3951827
cg00000108 0.9348269
cg00000109 0.8427696
cg00000165 0.2855011
cg00000236 0.6445535
cg00000289 0.6026016
cg00000292 0.7799216
cg00000321 0.2533864
cg00000363 0.3814282
cg00000622 0.0216865
cg00000658 0.8028572
cg00000714 0.152178
cg00000721 0.9166875
cg00000734 0.08468989
cg00000769 0.04026952
cg00000807 0.8769826
cg00000884 0.821629
cg00000905 0.08710097
cg00000924 0.5511937
cg00000948 0.8586919

Total number of rows: 485577

Table truncated, full table size 10054 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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