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Sample GSM1125320 Query DataSets for GSM1125320
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C221 (BeadChip)
Sample type genomic
Source name C221
Organism Homo sapiens
Characteristics individual identifier: C221
monozygotic twin relationship: MZ twin of C21
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C221
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4010448
cg00000108 0.9228982
cg00000109 0.8804864
cg00000165 0.270648
cg00000236 0.618943
cg00000289 0.598888
cg00000292 0.7909579
cg00000321 0.2541703
cg00000363 0.4205574
cg00000622 0.01081209
cg00000658 0.8104289
cg00000714 0.1702633
cg00000721 0.9060566
cg00000734 0.08766198
cg00000769 0.04022692
cg00000807 0.8777801
cg00000884 0.8643849
cg00000905 0.1078232
cg00000924 0.5550533
cg00000948 0.8564882

Total number of rows: 485577

Table truncated, full table size 10049 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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