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Sample GSM1125319 Query DataSets for GSM1125319
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C213 (BeadChip)
Sample type genomic
Source name C213
Organism Homo sapiens
Characteristics individual identifier: C213
monozygotic twin relationship: MZ twin of C22
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C213
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4721176
cg00000108 0.9381982
cg00000109 0.9079108
cg00000165 0.1971855
cg00000236 0.6759509
cg00000289 0.6348066
cg00000292 0.784963
cg00000321 0.3111233
cg00000363 0.3518447
cg00000622 0.02059332
cg00000658 0.8203365
cg00000714 0.1764873
cg00000721 0.9337769
cg00000734 0.0875877
cg00000769 0.05719398
cg00000807 0.8690654
cg00000884 0.845708
cg00000905 0.1028909
cg00000924 0.5289809
cg00000948 0.8592392

Total number of rows: 485577

Table truncated, full table size 10045 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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