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Sample GSM1125318 Query DataSets for GSM1125318
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C212 (BeadChip)
Sample type genomic
 
Source name C212
Organism Homo sapiens
Characteristics individual identifier: C212
monozygotic twin relationship: MZ twin of C22
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
 
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C212
normal CD14 cells
Data processing GenomeStudio softwarre
 
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
E-mail(s) thomas.down@gurdon.cam.ac.uk
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
 
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
ID_REF
VALUE Average Beta

Data table
ID_REF VALUE
cg00000029 0.4733918
cg00000108 0.9164056
cg00000109 0.8203654
cg00000165 0.1919633
cg00000236 0.6085147
cg00000289 0.6499398
cg00000292 0.7432937
cg00000321 0.2578854
cg00000363 0.3237388
cg00000622 0.01979161
cg00000658 0.7805287
cg00000714 0.1231274
cg00000721 0.9025148
cg00000734 0.07202703
cg00000769 0.04161378
cg00000807 0.8553821
cg00000884 0.8305949
cg00000905 0.08459401
cg00000924 0.4847469
cg00000948 0.8555895

Total number of rows: 485577

Table truncated, full table size 10055 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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