GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Sample GSM1125316 Query DataSets for GSM1125316
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C122 (BeadChip)
Sample type genomic
Source name C122
Organism Homo sapiens
Characteristics individual identifier: C122
monozygotic twin relationship: MZ twin of C11
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C122
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4932349
cg00000108 0.9441906
cg00000109 0.778481
cg00000165 0.2306961
cg00000236 0.6393206
cg00000289 0.6116412
cg00000292 0.8030115
cg00000321 0.320804
cg00000363 0.3887865
cg00000622 0.0178148
cg00000658 0.8186558
cg00000714 0.1793932
cg00000721 0.9254488
cg00000734 0.07426281
cg00000769 0.05438738
cg00000807 0.8654197
cg00000884 0.8436456
cg00000905 0.09884267
cg00000924 0.4944674
cg00000948 0.8740674

Total number of rows: 485577

Table truncated, full table size 10047 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap