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Sample GSM1125313 Query DataSets for GSM1125313
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells_C111 (BeadChip)
Sample type genomic
Source name C111
Organism Homo sapiens
Characteristics individual identifier: C111
monozygotic twin relationship: MZ twin of C12
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: C111
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.5455253
cg00000108 0.9252844
cg00000109 0.8453276
cg00000165 0.1971958
cg00000236 0.6690331
cg00000289 0.6
cg00000292 0.7823937
cg00000321 0.3552836
cg00000363 0.397044
cg00000622 0.01873281
cg00000658 0.8073277
cg00000714 0.1898802
cg00000721 0.90003
cg00000734 0.08385349
cg00000769 0.05042537
cg00000807 0.8729534
cg00000884 0.8366762
cg00000905 0.110812
cg00000924 0.5087585
cg00000948 0.8717362

Total number of rows: 485577

Table truncated, full table size 10040 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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