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Sample GSM1125312 Query DataSets for GSM1125312
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells, 3rd pair, 2nd individual_T32 (BeadChip)
Sample type genomic
Source name T32
Organism Homo sapiens
Characteristics individual identifier: T32
monozygotic twin relationship: MZ twin of T31
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: T32
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4043184
cg00000108 0.9172261
cg00000109 0.8676471
cg00000165 0.2018877
cg00000236 0.6114727
cg00000289 0.580633
cg00000292 0.7575533
cg00000363 0.354156
cg00000622 0.01438371
cg00000658 0.814768
cg00000714 0.1967787
cg00000721 0.9012474
cg00000734 0.08949699
cg00000769 0.04632847
cg00000807 0.862133
cg00000884 0.8467014
cg00000905 0.08421229
cg00000924 0.5160541
cg00000948 0.8255026

Total number of rows: 485577

Table truncated, full table size 10000 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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