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Sample GSM1125311 Query DataSets for GSM1125311
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells, 3rd pair, 1st individual_T31 (BeadChip)
Sample type genomic
Source name T31
Organism Homo sapiens
Characteristics individual identifier: T31
monozygotic twin relationship: MZ twin of T32
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: T31
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4569003
cg00000108 0.900792
cg00000109 0.8918299
cg00000165 0.2064992
cg00000236 0.596458
cg00000289 0.6220797
cg00000292 0.7901354
cg00000321 0.2660098
cg00000363 0.3655177
cg00000622 0.01939912
cg00000658 0.8388201
cg00000714 0.2119154
cg00000721 0.9213799
cg00000734 0.1086777
cg00000769 0.05072653
cg00000807 0.8488008
cg00000884 0.8617495
cg00000905 0.07420272
cg00000924 0.5043787
cg00000948 0.8596657

Total number of rows: 485577

Table truncated, full table size 10038 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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