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Sample GSM1125310 Query DataSets for GSM1125310
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells, 2nd pair, 2nd individual_T22 (BeadChip)
Sample type genomic
Source name T22
Organism Homo sapiens
Characteristics individual identifier: T22
monozygotic twin relationship: MZ twin of T21
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: T22
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4608443
cg00000108 0.9182749
cg00000109 0.8602338
cg00000165 0.1456337
cg00000236 0.5862985
cg00000289 0.5562189
cg00000292 0.7808493
cg00000321 0.2404734
cg00000363 0.3190683
cg00000622 0.001206364
cg00000658 0.8039006
cg00000714 0.2031991
cg00000721 0.9057022
cg00000734 0.07762603
cg00000769 0.04681715
cg00000807 0.8219225
cg00000884 0.7979842
cg00000905 0.0860384
cg00000924 0.4756685
cg00000948 0.8613392

Total number of rows: 485577

Table truncated, full table size 10047 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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