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Sample GSM1125309 Query DataSets for GSM1125309
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells, 2nd pair, 1st individual_T21 (BeadChip)
Sample type genomic
Source name T21
Organism Homo sapiens
Characteristics individual identifier: T21
monozygotic twin relationship: MZ twin of T22
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: T21
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.4853996
cg00000108 0.9123879
cg00000109 0.8598575
cg00000165 0.2287223
cg00000236 0.6465008
cg00000289 0.6584786
cg00000292 0.8124915
cg00000321 0.2900721
cg00000363 0.4028106
cg00000622 0.02465851
cg00000658 0.85
cg00000714 0.2419015
cg00000721 0.9224158
cg00000734 0.1222071
cg00000769 0.06168659
cg00000807 0.8726903
cg00000884 0.861973
cg00000905 0.1149964
cg00000924 0.5183188
cg00000948 0.853699

Total number of rows: 485577

Table truncated, full table size 10029 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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