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Sample GSM1125308 Query DataSets for GSM1125308
Status Public on Apr 22, 2013
Title genomic DNA from CD14 B-cells, 1st pair 1st individual_T11 (BeadChip)
Sample type genomic
Source name T11
Organism Homo sapiens
Characteristics individual identifier: T11
cell type: CD14 cells
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was extracted using the Qiagen DNeasy kit.
Label Cy5 and Cy3
Label protocol Standard Illumina Protocol
Hybridization protocol bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
Scan protocol Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
Description Sample name: T11
normal CD14 cells
Data processing GenomeStudio softwarre
Submission date Apr 18, 2013
Last update date Apr 22, 2013
Contact name Thomas A Down
Organization name University of Cambridge
Department WT/CRUK Gurdon Institute
Street address Tennis Court Road
City Cambridge
ZIP/Postal code CB2 1QN
Country United Kingdom
Platform ID GPL13534
Series (2)
GSE46168 Inactive or moderately active human promoters are enriched for inter-individual epialleles [Methylation BeadChip]
GSE46220 Inactive or moderately active human promoters are enriched for inter-individual epialleles

Data table header descriptions
VALUE Average Beta

Data table
cg00000029 0.5207032
cg00000108 0.9093111
cg00000109 0.8843445
cg00000165 0.1618201
cg00000236 0.5782838
cg00000289 0.6058463
cg00000292 0.7577141
cg00000363 0.3736875
cg00000622 0.01909178
cg00000658 0.7986577
cg00000714 0.2125415
cg00000721 0.8791245
cg00000734 0.09977674
cg00000769 0.05645455
cg00000807 0.8516821
cg00000884 0.8412463
cg00000905 0.1035446
cg00000924 0.5150114
cg00000948 0.8408955

Total number of rows: 485577

Table truncated, full table size 10040 Kbytes.

Supplementary data files not provided
Processed data included within Sample table

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