|
| Status |
Public on Sep 01, 2013 |
| Title |
UT0103M [Methylation] |
| Sample type |
genomic |
| |
|
| Source name |
Myomet
|
| Organism |
Homo sapiens |
| Characteristics |
gender: Female
tissue: frozen tissue of myometrium with leiomyoma
disease state: myometrium tissue obtained from uterus with leiomyoma
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
genomic DNA was extracted and purified from frozen tissue of myometrium and leiomyoma obtained from the woman who underwent hysterectomy using Qiagen DNeasy Kit according to standard instructions
|
| Label |
Alexa555 and Alexa647
|
| Label protocol |
Standard Illumina Protocol
|
| |
|
| Hybridization protocol |
bisulphite converted DNA was amplified, fragmented and hybridised to Illumina Infinium Human Methylation450 Beadchip using standard Illumina protocol
|
| Scan protocol |
Arrays were imaged using BeadArray Reader using standard recommended Illumina scanner setting
|
| Description |
myometrium tissue obtained from same case as UT0103L
|
| Data processing |
GenomeStudio Methylation Module
|
| |
|
| Submission date |
Mar 15, 2013 |
| Last update date |
Sep 01, 2013 |
| Contact name |
Ryo Maekawa |
| E-mail(s) |
ryomaekawa@gmail.com
|
| Organization name |
Yamaguchi University School of Medicine
|
| Department |
Department of Obstetrics and Gynecology
|
| Street address |
Minami-Kogushi 1-1-1
|
| City |
Ube |
| ZIP/Postal code |
755-8505 |
| Country |
Japan |
| |
|
| Platform ID |
GPL13534 |
| Series (2) |
| GSE45187 |
Epigenome analysis of uterin leiomyoma and myometrium with or without leiomyoma [Methylation data] |
| GSE45189 |
Epigenome analysis of uterin leiomyoma and myometrium with or without leiomyoma |
|
