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Sample GSM1087534 Query DataSets for GSM1087534
Status Public on Jan 01, 2016
Title MDD 1060
Sample type RNA
 
Source name human_brain_AMY
Organism Homo sapiens
Characteristics tissue: human_brain_AMY
Sex: M
pair: 15
disease status: MDD
Extracted molecule total RNA
Extraction protocol unknown
Label biotin
Label protocol Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
 
Hybridization protocol standard Affymetrix protocol
Scan protocol Microarrays were scanned and summarized by manufacturers’ defaults
Description Gene expression data from human postmotem brain region AMY
Data processing Data from Affymetrix arrays were processed by robust multi-array (RMA) method
 
Submission date Feb 22, 2013
Last update date Jan 01, 2016
Contact name YING DING
E-mail(s) dingying85@gmail.com
Organization name Pfizer
Department Computational Biology
Street address 10777 Science Center Dr.
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL570
Series (1)
GSE44593 Molecular Evidence for a Dimensional Basis of Depression

Data table header descriptions
ID_REF
VALUE RMA normalized signal intensity

Data table
ID_REF VALUE
1007_s_at 1011
1053_at 104
117_at 41
121_at 136
1255_g_at 71
1294_at 24
1316_at 46
1320_at 6
1405_i_at 16
1431_at 20
1438_at 10
1487_at 114
1494_f_at 21
1552256_a_at 209
1552257_a_at 271
1552258_at 5
1552261_at 9
1552263_at 9
1552264_a_at 362
1552266_at 10

Total number of rows: 40610

Table truncated, full table size 557 Kbytes.




Supplementary file Size Download File type/resource
GSM1087534_1060-ACG-1.CEL.gz 5.0 Mb (ftp)(http) CEL
Processed data included within Sample table

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