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Sample GSM1071639 Query DataSets for GSM1071639
Status Public on Jan 28, 2016
Title samples collected from U87 RhoE KD after 48h (rep 1)
Sample type RNA
 
Source name U87 cells
Organism Homo sapiens
Characteristics cell line: U87
treatment: RhoE KD
time: 48 h
Treatment protocol siRNA reverse transfection using lipofectamine RNAimax in U87 cells
Growth protocol U87 cells were grown in a dish until 70% confluency
Extracted molecule total RNA
Extraction protocol RNA was extracted using Qiagen (Valencia, CA) RNeasy columns
Label Cy3
Label protocol RNA was labelled using the Agilent LIQA-Quickamp Protocol
 
Hybridization protocol RNA was hybridized using the Agilent hybridization protocol
Scan protocol Agilent Technologies Scanner G2505C US92200305
Data processing data was read and quantile normalized
 
Submission date Jan 28, 2013
Last update date Jan 28, 2016
Contact name Nil Turan
E-mail(s) philipp.antczak@gmail.com
Organization name University of Birmingham
Street address University of Birmingham, Edgbaston
City Birmingham
ZIP/Postal code B15 2TT
Country United Kingdom
 
Platform ID GPL13607
Series (1)
GSE43812 RhoE KD in U87 cells

Data table header descriptions
ID_REF
VALUE quantile normalized expression values

Data table
ID_REF VALUE
1 16.50085621
2 4.48218197
3 4.720134922
4 7.765884046
5 9.409825489
6 6.636528695
7 12.39514298
8 11.87627075
9 4.956228542
10 5.790046375
11 4.720134922
12 10.09818358
13 8.113896324
14 9.628628132
15 12.88497425
16 4.863020364
17 7.550027113
18 6.747170426
19 8.574843067
20 9.756614994

Total number of rows: 62976

Table truncated, full table size 1089 Kbytes.




Supplementary file Size Download File type/resource
GSM1071639_U87_RhoE_KD_48hr_1.txt.gz 3.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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