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Sample GSM1071632 Query DataSets for GSM1071632
Status Public on Jan 28, 2016
Title samples collected from U87 NSC after 24h (rep 1)
Sample type RNA
 
Source name U87 cells
Organism Homo sapiens
Characteristics cell line: U87
treatment: control
time: 24 h
Treatment protocol siRNA reverse transfection using lipofectamine RNAimax in U87 cells
Growth protocol U87 cells were grown in a dish until 70% confluency
Extracted molecule total RNA
Extraction protocol RNA was extracted using Qiagen (Valencia, CA) RNeasy columns
Label Cy3
Label protocol RNA was labelled using the Agilent LIQA-Quickamp Protocol
 
Hybridization protocol RNA was hybridized using the Agilent hybridization protocol
Scan protocol Agilent Technologies Scanner G2505C US92200305
Data processing data was read and quantile normalized
 
Submission date Jan 28, 2013
Last update date Jan 28, 2016
Contact name Nil Turan
E-mail(s) philipp.antczak@gmail.com
Organization name University of Birmingham
Street address University of Birmingham, Edgbaston
City Birmingham
ZIP/Postal code B15 2TT
Country United Kingdom
 
Platform ID GPL13607
Series (1)
GSE43812 RhoE KD in U87 cells

Data table header descriptions
ID_REF
VALUE quantile normalized expression values

Data table
ID_REF VALUE
1 16.36479701
2 4.753820383
3 4.518648404
4 7.575717657
5 9.708685679
6 6.103453326
7 12.24705585
8 11.78433465
9 5.282137621
10 6.086459404
11 5.32095474
12 9.376067448
13 8.234772782
14 9.40436599
15 12.73697429
16 4.806363256
17 7.625802358
18 6.762150657
19 9.179285137
20 9.535489687

Total number of rows: 62976

Table truncated, full table size 1090 Kbytes.




Supplementary file Size Download File type/resource
GSM1071632_U87_NSC_24hr_1.txt.gz 3.1 Mb (ftp)(http) TXT
Processed data included within Sample table

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