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Sample GSM1071625 Query DataSets for GSM1071625
Status Public on Dec 31, 2014
Title K9-162 P5
Sample type genomic
 
Channel 1
Source name Kidney tumor
Organism Homo sapiens
Characteristics Stage: Xenografted tumor at P5
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was isolated from human renal cancer and from spheres using DNeasy MiniKit (Qiagen, France) according to the manufacturer’s protocol
Label Cy3
Label protocol The digested DNAs were labeled with random primers using Agilent Genomic DNA Labeling Kit Plus for 2 hours at 37°C, according to the manufacturer’s instructions
 
Channel 2
Source name Universal Reference HAPMAP (Promega, USA, Madison)
Organism Homo sapiens
Characteristics reference: Human Universal Reference
Extracted molecule genomic DNA
Extraction protocol Genomic DNA was isolated from human renal cancer and from spheres using DNeasy MiniKit (Qiagen, France) according to the manufacturer’s protocol
Label Cy5
Label protocol The digested DNAs were labeled with random primers using Agilent Genomic DNA Labeling Kit Plus for 2 hours at 37°C, according to the manufacturer’s instructions
 
 
Hybridization protocol The digested DNAs were labeled with random primers using Agilent Genomic DNA Labeling Kit Plus for 2 hours at 37°C, according to the manufacturer’s instructions
Scan protocol Agilent DNA Microarray Scanner G2565BA
Description K9-162 P5
Data processing Log ratios were determined with Agilent Feature Extraction software (v 9.1.3.1)
 
Submission date Jan 28, 2013
Last update date Dec 31, 2014
Contact name Anne Janin
E-mail(s) jean-paul.feugeas@sls.aphp.fr
Phone +33142494012
Organization name University Paris 7, INSERM, APHP
Street address 1 Av C Vellefaux
City Paris
ZIP/Postal code 75010
Country France
 
Platform ID GPL10123
Series (1)
GSE43810 Phenotypic and genotypic stability in a preclinical model of renal cell carcinoma

Supplementary file Size Download File type/resource
GSM1071625_K9-162_P5.txt.gz 18.7 Mb (ftp)(http) TXT
Processed data are available on Series record

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