|
| Status |
Public on Feb 22, 2013 |
| Title |
1868-N |
| Sample type |
genomic |
| |
|
| Source name |
post mortem frontal cortex
|
| Organism |
Homo sapiens |
| Characteristics |
suicide status (1 = suicide, 0 = no): 0
diagnosis: Control
Sex: Female
race: African
age: 17
pmi: 17
|
| Extracted molecule |
genomic DNA |
| Extraction protocol |
All genomic DNA from nuclei was isolated with the MasterPure DNA Purification Kit (Epicentre Biotechnologies) according to manufacturer's instructions.
|
| Label |
Cy3, Cy5
|
| Label protocol |
Standard Illumina protocol
|
| |
|
| Hybridization protocol |
Bisulfite-converted DNA was fragmented and hybridized to Illumina Infinium Human Methylation450 Beadchip Kit according to manfacturer's manual
|
| Scan protocol |
Polymer-coated chips were image-processed in Illumina's iScan scanner
|
| Description |
25_1868-N(P1C1)_7786915011_R01C01
|
| Data processing |
Data were extracted using Methylation Module of GenomeStudio v1.0 Software
|
| |
|
| Submission date |
Oct 24, 2012 |
| Last update date |
Aug 21, 2013 |
| Contact name |
Jerry Guintivano |
| E-mail(s) |
jchoa002@umaryland.edu
|
| Organization name |
Johns Hopkins University
|
| Street address |
720 Rutland Avenue, Ross 1068
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
| |
|
| Platform ID |
GPL13534 |
| Series (1) |
| GSE41826 |
A Cell Epigenotype Specific Model for the Correction of Cellular Heterogeneity in the Brain |
|
