|
Status |
Public on Feb 22, 2013 |
Title |
5175-N |
Sample type |
genomic |
|
|
Source name |
post mortem frontal cortex
|
Organism |
Homo sapiens |
Characteristics |
suicide status (1 = suicide, 0 = no): 1 diagnosis: Depression Sex: Male race: Caucasian age: 47 pmi: 22
|
Extracted molecule |
genomic DNA |
Extraction protocol |
All genomic DNA from nuclei was isolated with the MasterPure DNA Purification Kit (Epicentre Biotechnologies) according to manufacturer's instructions.
|
Label |
Cy3, Cy5
|
Label protocol |
Standard Illumina protocol
|
|
|
Hybridization protocol |
Bisulfite-converted DNA was fragmented and hybridized to Illumina Infinium Human Methylation450 Beadchip Kit according to manfacturer's manual
|
Scan protocol |
Polymer-coated chips were image-processed in Illumina's iScan scanner
|
Description |
7_5175-N(P1A7)_7766130090_R01C02
|
Data processing |
Data were extracted using Methylation Module of GenomeStudio v1.0 Software
|
|
|
Submission date |
Oct 24, 2012 |
Last update date |
Aug 21, 2013 |
Contact name |
Jerry Guintivano |
E-mail(s) |
jchoa002@umaryland.edu
|
Organization name |
Johns Hopkins University
|
Street address |
720 Rutland Avenue, Ross 1068
|
City |
Baltimore |
State/province |
MD |
ZIP/Postal code |
21205 |
Country |
USA |
|
|
Platform ID |
GPL13534 |
Series (1) |
GSE41826 |
A Cell Epigenotype Specific Model for the Correction of Cellular Heterogeneity in the Brain |
|