NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1008797 Query DataSets for GSM1008797
Status Public on Jan 01, 2013
Title OSCC microRNA 327
Sample type RNA
 
Source name OSCC
Organism Homo sapiens
Characteristics gender: M
source tissue: Tongue
tissue: Oral cavity squamous cell carcinoma tumor
case: 327
Extracted molecule total RNA
Extraction protocol Tri-reagent (Sigma)
Label cy3
Label protocol Standard Agilent protocol
 
Hybridization protocol Standard Agilent protocol
Scan protocol Standard Agilent protocol
Description Tongue
Data processing The scanned images were analyzed with Feature Extraction Software 10.7.3.1 (Agilent) using protocol miRNA_107_Sep09
 
Submission date Sep 24, 2012
Last update date Jan 01, 2013
Contact name Jiexin Zhang
E-mail(s) jiexinzhang@mdanderson.org
Organization name UT MD Anderson Cancer Center
Department Bioinformatics & Computational Biology
Street address 1515 Holcombe Blvd
City Houston
State/province TX
ZIP/Postal code 77030
Country USA
 
Platform ID GPL14943
Series (2)
GSE41115 Integrative genomic characterization of oral squamous cell carcinoma identifies frequent somatic drivers (microRNA)
GSE41117 Integrative genomic characterization of oral squamous cell carcinoma identifies frequent somatic drivers

Data table header descriptions
ID_REF
VALUE Agilent Feature Extraction default gProcessedSignal

Data table
ID_REF VALUE
1 1.57E+02
2 -7.90E-01
3 6.05E+00
4 6.49E-01
5 4.00E+00
6 2.27E+01
7 3.10E+00
8 -8.93E-01
9 2.00E+00
10 -7.68E-01
11 -1.16E+00
12 2.66E+00
13 6.40E-01
14 2.12E+01
15 -4.60E-01
16 2.48E+00
17 8.64E+00
18 4.26E+00
19 6.41E-01
20 1.32E+00

Total number of rows: 14907

Table truncated, full table size 212 Kbytes.




Supplementary file Size Download File type/resource
GSM1008797_irs_JF_7962_7963_7964_AmH14_10974_30801.txt.gz 845.1 Kb (ftp)(http) TXT
Processed data included within Sample table
Processed data provided as supplementary file

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap