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Sample GSM1003752 Query DataSets for GSM1003752
Status Public on Sep 13, 2012
Title Stanford_ChipSeq_MEL H3K27me3 IgG-rab (was Stanford_ChipSeq_MEL_H3K27ac_IgG-rab) (superseded by GSE94230)
Sample type SRA
 
Source name MEL
Organism Mus musculus
Characteristics lab: Stanford-m
lab description: Snyder - Stanford University
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: MEL
cell organism: mouse
cell description: Leukemia (K562 analog)
cell sex: M
antibody: H3K27me3
treatment: None
treatment description: No special treatment or protocol applies
control: IgG-rab
control description: Input signal from Normal Rabbit IgG ChIP-seq.
age: immortalized
age description: Immortal cells
control: IgG-rab
control description: Input signal from Normal Rabbit IgG ChIP-seq.
controlid: MEL/None/Input/IgG-rab
labversion: PeakSeq1.0
strain: Unknown
strain description: Unknown strain origin
Biomaterial provider Weissman lab
Treatment protocol None
Extracted molecule genomic DNA
Extraction protocol Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeSydhHist
 
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina Genome Analyzer
 
Description ****************************
GSM1003752 record metadata submitted on Sep 13 2012 may be obsolete, up to date experimental metadata was resubmitted by ENCODE DCC and is available at GSE94230
****************************
Data processing http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeSydhHist
 
Submission date Sep 13, 2012
Last update date Feb 06, 2017
Contact name ENCODE DCC
E-mail(s) encode-help@lists.stanford.edu
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platform ID GPL9185
Series (3)
GSE32218 Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
GSE51334 DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions
Relations
Superseded by GSE94230
BioSample SAMN01174207

Supplementary data files not provided
Raw data provided as supplementary file
Processed data not provided for this record

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