|
Status |
Public on Sep 13, 2012 |
Title |
Stanford_ChipSeq_MEL H3K27me3 IgG-rab (was Stanford_ChipSeq_MEL_H3K27ac_IgG-rab) (superseded by GSE94230) |
Sample type |
SRA |
|
|
Source name |
MEL
|
Organism |
Mus musculus |
Characteristics |
lab: Stanford-m lab description: Snyder - Stanford University datatype: ChipSeq datatype description: Chromatin IP Sequencing cell: MEL cell organism: mouse cell description: Leukemia (K562 analog) cell sex: M antibody: H3K27me3 treatment: None treatment description: No special treatment or protocol applies control: IgG-rab control description: Input signal from Normal Rabbit IgG ChIP-seq. age: immortalized age description: Immortal cells control: IgG-rab control description: Input signal from Normal Rabbit IgG ChIP-seq. controlid: MEL/None/Input/IgG-rab labversion: PeakSeq1.0 strain: Unknown strain description: Unknown strain origin
|
Biomaterial provider |
Weissman lab
|
Treatment protocol |
None
|
Extracted molecule |
genomic DNA |
Extraction protocol |
Instrument model unknown. ("Illumina Genome Analyzer" specified by default). For more information, see http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeSydhHist
|
|
|
Library strategy |
ChIP-Seq |
Library source |
genomic |
Library selection |
ChIP |
Instrument model |
Illumina Genome Analyzer |
|
|
Description |
**************************** GSM1003752 record metadata submitted on Sep 13 2012 may be obsolete, up to date experimental metadata was resubmitted by ENCODE DCC and is available at GSE94230 ****************************
|
Data processing |
http://genome.ucsc.edu/cgi-bin/hgTrackUi?db=mm9&g=wgEncodeSydhHist
|
|
|
Submission date |
Sep 13, 2012 |
Last update date |
Feb 06, 2017 |
Contact name |
ENCODE DCC |
E-mail(s) |
encode-help@lists.stanford.edu
|
Organization name |
ENCODE DCC
|
Street address |
300 Pasteur Dr
|
City |
Stanford |
State/province |
CA |
ZIP/Postal code |
94305-5120 |
Country |
USA |
|
|
Platform ID |
GPL9185 |
Series (3) |
GSE32218 |
Histone Modifications by ChIP-seq from ENCODE/Stanford/Yale |
GSE49847 |
A comparative encyclopedia of DNA elements in the mouse genome |
GSE51334 |
DNA replication-timing boundaries separate stable chromosome domains with cell-type-specific functions |
|
Relations |
Superseded by |
GSE94230 |
BioSample |
SAMN01174207 |