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Sample GSM1000201 Query DataSets for GSM1000201
Status Public on Sep 10, 2012
Title LICR_ChipSeq_BAT_Input_adult-24wks
Sample type SRA
Source name BAT
Organism Mus musculus
Characteristics lab: LICR-m
lab description: Ren - Ludwig Institue for Cancer Research
datatype: ChipSeq
datatype description: Chromatin IP Sequencing
cell: BAT
cell organism: mouse
cell description: Brown adipocytes tissue
cell sex: M
antibody: Input
antibody description: Control signal which may be subtracted from experimental raw signal before peaks are called.
age: adult-24wks
age description: Adult 24 weeks
age: adult-24wks
age description: Adult 24 weeks
control: std
control description: Standard input signal for most experiments.
controlid: wgEncodeEM002656
labversion: 7/13/2010 Lane 5
replicate: 1
softwareversion: HCS
strain: C57BL/6
strain description: C57 black 6, the most common inbred strain of laboratory mouse
Biomaterial provider Jerrold M. Olefsky Lab, UCSD
Growth protocol BAT_Ren_protocol.pdf
Extracted molecule genomic DNA
Extraction protocol
Library strategy ChIP-Seq
Library source genomic
Library selection ChIP
Instrument model Illumina HiSeq 2000
Data processing
Submission date Sep 10, 2012
Last update date May 15, 2019
Contact name ENCODE DCC
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
Platform ID GPL13112
Series (2)
GSE31039 Histone Modifications by ChIP-seq from ENCODE/LICR
GSE49847 A comparative encyclopedia of DNA elements in the mouse genome
SRA SRX185879
BioSample SAMN01163897
Named Annotation GSM1000201_mm9_wgEncodeLicrHistoneBatInputMAdult24wksC57bl6StdSig.bigWig

Supplementary file Size Download File type/resource
GSM1000201_mm9_wgEncodeLicrHistoneBatInputMAdult24wksC57bl6StdSig.bigWig 83.0 Mb (ftp)(http) BIGWIG
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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