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Series GSE97952 Query DataSets for GSE97952
Status Public on Jun 18, 2018
Title miRNA expression data from multilineage differentiation of hiPSC
Platform organism synthetic construct
Sample organism Homo sapiens
Experiment type Non-coding RNA profiling by array
Summary We built a comprehensive miRNA expression atlas for multilineage comparison by differentiating induced PSC (iPSC) into three lineages representatively derived from the three germ layers and profiling the dynamic miRNA expression by microarray.
Overall design The hiPSC line iBC 1.2 was induced to differentiate into representative lineages of the three germ layers, namely, hepatocytes for endoderm (HD), nephron progenitors for mesoderm (KD), and neural progenitors for ectoderm (ND), respectively. miRNA expression profiling was performed using small RNA microarrays. Each lineage differentiation including eight samples with replicates for four time-points (day 0, 3, 6, 10) were collected and profiled.
Contributor(s) Li L, Chan WY, Cheung HH
Citation(s) 29941943
Submission date Apr 18, 2017
Last update date Sep 18, 2018
Contact name Lu Li
Phone 323-442-0277
Organization name University of Southern California
Department School of Pharmacy
Street address Room 706, 1985 Zonal Ave
City Los Angeles
State/province CA
ZIP/Postal code 90089
Country USA
Platforms (1)
GPL19117 [miRNA-4] Affymetrix Multispecies miRNA-4 Array
Samples (24)
GSM2583570 HD 0, biological rep-1
GSM2583571 HD 0, biological rep-2
GSM2583572 HD 3, biological rep-1
BioProject PRJNA383449

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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97952_RAW.tar 19.8 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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