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Series GSE97551 Query DataSets for GSE97551
Status Public on Oct 26, 2018
Title Genome-wide maps of ONECUT2 binding sites in 22Rv1 human castration resistant prostate cancer cell
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary In order to determine whether ONECUT2 directly regulates the AR transcriptional program, or whether the effect of ONECUT2 is a mere consequence of AR downregulation, we performed ONECUT2 ChIP-sequencing (ChIP-seq) using the 22Rv1 human castration resistant prostate cancer cell line, which expresses high levels of ONECUT2 in comparison to other human prostate cancer cell lines
Overall design Genome-wide binding profile of ONECUT2 transcription factor in 22Rv1 cell.
Contributor(s) Freeman MR, Rotinen M, You S
Citation(s) 30478421
Submission date Apr 09, 2017
Last update date May 15, 2019
Contact name Sungyong You
Organization name Cedars-Sinai Medical Center
Department Surgery
Lab Freeman Lab.
Street address Beverly Blvd 8400
City LA
State/province CA
ZIP/Postal code 90048
Country USA
Platforms (1)
GPL21290 Illumina HiSeq 3000 (Homo sapiens)
Samples (4)
GSM2571990 22RV1-OC2-1
GSM2571991 22RV1-OC2-2
GSM2571992 22RV1-Input-1
BioProject PRJNA382273
SRA SRP103756

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE97551_22RV1-IP-OC2-1.vs.Input_peaks.narrowPeak.gz 358.9 Kb (ftp)(http) NARROWPEAK
GSE97551_22RV1-IP-OC2-2.vs.Input_peaks.narrowPeak.gz 286.8 Kb (ftp)(http) NARROWPEAK
GSE97551_22RV1_OC2_idr.narrowPeak.gz 78.8 Kb (ftp)(http) NARROWPEAK
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Raw data are available in SRA
Processed data are available on Series record

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