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Series GSE9561 Query DataSets for GSE9561
Status Public on Nov 22, 2007
Title human induced pluripotent stem cell
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Successful reprogramming of differentiated human somatic cells into a pluripotent state would allow creation of patient- and disease-specific stem cells. We previously reported generation of induced pluripotent stem (iPS) cells, capable of germline transmission, from mouse somatic cells by transduction of four defined transcription factors. Here, we demonstrate the generation of iPS cells from adult human dermal fibroblasts with the same four factors: Oct3/4, Sox2, Klf4, and c-Myc. Human iPS cells were expandable and similar to human embryonic stem (ES) cells in morphology, proliferation, surface antigens, gene expression, DNA methylation status of pluripotent cell-specific genes, and telomerase activity. Furthermore, these cells could differentiate into cell types of the three germ layers in vitro and in teratomas. These findings demonstrate that iPS cells can be generated from adult human fibroblasts.
Keywords: cell type comparison
Overall design Total RNA from HDF and hiPS cells (clone 201B) was labeled with Cy3. Samples were hybridized with Whole Human Genome Microarray 4 x 44K (G4112F, Agilent), with the one color protocol. Arrays were scanned with a G2565BA Microarray Scanner System (Agilent). Data analyzed by using GeneSpring GX7.3.1 software (Agilent). Array data of hES H9 cells (GSM194390) was retrieved from GEO ( Genes with "present" flag value in all three samples were used for analyses (32266 genes).
Contributor(s) Takahashi K, Narita M, Yamanaka S
Citation(s) 18035408
Submission date Nov 08, 2007
Last update date Feb 22, 2018
Contact name Shinya Yamanaka
Phone 81-75-366-7041
Organization name Center for iPS Cell Research and Applicaton (CiRA), Kyoto University
Street address 53 Kawahara-machi, Shogoin, Sakyo-ku
City Kyoto
ZIP/Postal code 606-8507
Country Japan
Platforms (1)
GPL4133 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
Samples (2)
GSM241846 human iPS cells
GSM242095 HDF
BioProject PRJNA103377

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE9561_RAW.tar 24.6 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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