GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
Series GSE93003 Query DataSets for GSE93003
Status Public on May 31, 2022
Title Whole-transcriptome profiling of laser-capture microdissected striatal neurons at single-cell resolution using retrograde tracing
Organism Rattus norvegicus
Experiment type Expression profiling by high throughput sequencing
Summary Pathway-specific striatal transcripts were identified in a neuroanatomically defined manner using retrograde tracing, laser capture micodissection and whole-transcriptome sequencing.
Overall design Fluorescent retrograde tracers were stereotaxically infused into striatal terminal fields and laser capture microdissection was used to isolate striatomesencephalic and striatipallidal neurons at single-cell resolution.
Contributor(s) Miller ML, Hurd YL
Citation missing Has this study been published? Please login to update or notify GEO.
NIH grant(s)
Grant ID Grant title Affiliation Name
F30 DA038954 Identifying distinct striatonigral and striatopallidal disturbances MOUNT SINAI SCHOOL OF MEDICINE Michael Lawrence Miller
Submission date Dec 29, 2016
Last update date Jun 01, 2022
Contact name Michael Lawrence Miller
Organization name Icahn School of Medicine at Mount Sinai
Department Fishberg Department of Neuroscience
Lab Hurd Laboratory of Molecular Psychopharmacology
Street address One Gustave L. Levy Place
City New York
State/province NY
ZIP/Postal code 10029
Country USA
Platforms (1)
GPL14844 Illumina HiSeq 2000 (Rattus norvegicus)
Samples (5)
GSM2441830 SN1
GSM2441831 SN2
GSM2441832 SP1
BioProject PRJNA359349
SRA SRP095770

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE93003_DGE-Analysis.csv.gz 445.1 Kb (ftp)(http) CSV
GSE93003_RAW.tar 620.0 Kb (http)(custom) TAR (of CSV)
GSE93003_countsTable-Normalized.csv.gz 227.6 Kb (ftp)(http) CSV
GSE93003_countsTable-cpm.csv.gz 189.4 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap