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Series GSE92942 Query DataSets for GSE92942
Status Public on Sep 06, 2017
Title DNMT3b ChIP-Seq in enteric precursor cells
Organism Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary With the aim to elucidate the mechanism underlying the DNMT3b role in such processes, we have performed a chromatin immunoprecipitation coupled with massively parallel sequencing (ChIP-Seq) analysis to identify the DNMT3B target genes in enteric precursor cells (EPCs) from mice.
Overall design Identification of DNMT3b target genes in enteric precursor cells. 12 ChIPs and 12 Inputs were sequenced and analyzed.
Contributor(s) Borrego S, Villalba-Benito L, Torroglosa A
Citation(s) 28740121
Submission date Dec 27, 2016
Last update date May 15, 2019
Contact name Villalba Leticia
Organization name FISEVI
Street address Avda. Manuel Siurot s/n
City Seville
ZIP/Postal code 41013
Country Spain
Platforms (1)
GPL16417 Illumina MiSeq (Mus musculus)
Samples (24)
GSM2440779 ChIP-Seq_DNMT3b 1
GSM2440780 ChIP-Seq_DNMT3b 2
GSM2440781 ChIP-Seq_DNMT3b 3
BioProject PRJNA359117
SRA SRP095706

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SOFT formatted family file(s) SOFTHelp
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Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE92942_Merge_fastq_Pool1_peaks.bed.gz 1.4 Kb (ftp)(http) BED
GSE92942_Merge_fastq_Pool2_peaks.bed.gz 2.1 Kb (ftp)(http) BED
GSE92942_Merge_fastq_Pool3_peaks.bed.gz 9.8 Kb (ftp)(http) BED
GSE92942_RAW.tar 90.0 Kb (http)(custom) TAR (of BED)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file
Processed data are available on Series record

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